Stem-loop bmo-mir-3350

Accession

MI0014408

Description

Bombyx mori bmo-mir-3350 precursor miRNA

Sequence

56 reads, 18 reads per million, 3 experiments

uacguacaaagauuuauuaaaaauaaaaauaagaauugucauacaugcauguguuuuaaauugucgguagucggugauaauaauauguuUCAUGUAUUCUAAUUUUUCUUUAUAugcuuauauuuauauuguaauuguau
(((((((((........(((..(((.(((.((((((((..(((((((.(((((((....(((((((........))))))))))))))..)))))))..)))))))).))).)))..)))........)))))..)))).

Structure

-    --     agauuuau   aa   a   u        uc       -c       uuaa       gua 
 uacg  uacaa        uaa  aua aaa aagaauug  auacaug  auguguu    auugucg   g
 ||||  |||||        |||  ||| ||| ||||||||  |||||||  |||||||    |||||||    
 augu  auguu        auu  uAU UUU UUUUUAAU  UAUGUAC  uguauaa    uaauagu   u
u    ua     auauuuau   cg   A   C        CU       Uu       ----       ggc 

Annotation confidence Not enough data

Genome context

NW_004617072.1: 409-548 [+]

Mature bmo-miR-3350

• Accession: MIMAT0015535
• Description: Bombyx mori bmo-miR-3350 mature miRNA
• Sequence: 90 - UCAUGUAUUCUAAUUUUUCUUUAUA - 114
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415