Stem-loop bmo-mir-3351

Accession

MI0014409

Description

Bombyx mori bmo-mir-3351 precursor miRNA

Literature search

1 open access papers mention bmo-mir-3351
(2 sentences)

Sequence

76 reads, 13 reads per million, 3 experiments

guagcgcauUUACGUUGUGGAUGUCUAUGGGCgccaguaacuacuuaacagcuggugggcuguuuaaaacaaucgugauuauuuucuacu
((((.....(((((((((((((((((((.(((...(((....))).....))).)))))).))))...)))).))))).......)))).

Structure

-    --cgcau     -    ---    -      G   --gcc   a 
 guag       UUACG UUGU   GGAU GUCUAU GGC     agu a
 ||||       ||||| ||||   |||| |||||| |||     |||  
 cauc       agugc aaca   uuug cgggug ucg     uca c
u    uuuuauu     u    aaa    u      g   acaau   u 

Annotation confidence Low

Genome context

NW_004582023.1: 4826212-4826301 [-]

Mature bmo-miR-3351

• Accession: MIMAT0015536
• Description: Bombyx mori bmo-miR-3351 mature miRNA
• Sequence: 10 - UUACGUUGUGGAUGUCUAUGGGC - 32
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415