miRBase entry: bmo-mir-3353

Stem-loop bmo-mir-3353


Accession
MI0014411
Description
Bombyx mori bmo-mir-3353 precursor miRNA


Sequence

1 reads, 1.0 reads per million, 1 experiments
aggaagucaggcucuauuuuuucccaagauUCAGAUAAUUUUUAAACCAAAGUucgacaaguuggguucgcuggcuuagguguaaaaauguaacugauaaacagaguuugauucaca
.(..(((((((((((...............((((...(((((((.(((.(((((((((.......).)))..))))).))).)))))))....)))).....)))))))))))..).

Structure
a ga           auuuuuucccaagau    -AUA       A   A     --   - aa 
 g  agucaggcucu               UCAG    AUUUUUA ACC AAGUu  cga c  g
 |  |||||||||||               ||||    ||||||| ||| |||||  ||| |  u
 c  uuaguuugaga               aguc    uaaaaau ugg uucgg  gcu g  u
a ac           ----------caaau    aaug       g   a     uc   u gg 


Annotation confidence Not enough data
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Genome context
dbj|BSVE01000021.1|: 12512757-12512873 [-]

Database links

Mature bmo-miR-3353-5p

Accession MIMAT0015538
Description Bombyx mori bmo-miR-3353-5p mature miRNA
Sequence 31 - UCAGAUAAUUUUUAAACCAAAGU - 53
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415