Stem-loop bmo-mir-2733b-2

Accession

MI0014413

Description

Bombyx mori bmo-mir-2733b-2 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2733b-2
(4 sentences)

Sequence

32831 reads, 627.0 reads per million, 11 experiments

uaacauucuaUCACUGGGUGCGUGAUGAUUGUgguagagauuuucacauaacgccaccaucacaugugacaucucuccugucucucuguaaugcAGUCAUCAUACUCACAGUUGAUAuguuugacauuc
...((..(((((((((.(.(.(((((((((((((.((((((..((((((..............)))))).))))))))..............))))))))))).).).))).))))).)..))......

Structure

---uaa  uu -     -   G U C           --------------  u      uu      aacgcc 
      ca  c uaUCA CUG G G GUGAUGAUUGU              gg agagau  ucacau      a
      ||  | ||||| ||| | | |||||||||||              || ||||||  ||||||       
      gu  g AUAGU GAC C C UACUACUGAcg              cc ucucua  agugua      c
cuuaca  uu u     U   A U A           uaaugucucucugu  -      -c      cacuac 

Annotation confidence High

Genome context

dbj|BSVE01000011.1|: 367720-367848 [-]

Clustered miRNAs

17 other miRNAs are < 10 kb from bmo-mir-2733b-2

Mature bmo-miR-2733b-2-5p

• Accession: MIMAT0053143
• Description: Bombyx mori bmo-miR-2733b-2-5p mature miRNA
• Sequence: 11 - UCACUGGGUGCGUGAUGAUUGU - 32
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-2733b-2-3p

• Accession: MIMAT0053276
• Description: Bombyx mori bmo-miR-2733b-2-3p mature miRNA
• Sequence: 95 - AGUCAUCAUACUCACAGUUGAUA - 117
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415