miRBase entry: bmo-mir-3355

Stem-loop bmo-mir-3355


Accession
MI0014415
Description
Bombyx mori bmo-mir-3355 precursor miRNA


Sequence

9 reads, 4 reads per million, 2 experiments
gagaaucucuauuaugaggagaguucaguuuuaaaauuugaaacuuucaguagaauuuuacagcaaacuucgauggcgacgcauuguuaaauuUAAUACUAUAAAGGUUCAAGUCAgcaggaaagccugguuuuugagaaugucau
((.(.((((....((.(((....(((.(((.....((((((..((((.((((((((((.((((....(.(((....))).)..)))).))))))..))))..))))..)))))).))).)))...))).))....)))).).))..

Structure
--  g a    uauu  g   agag   a   uuaaa      aa    -c    --      u    caaa u   a 
  ga a ucuc    au agg    uuc guu     auuuga  cuuu  agua  gaauuu acag    c ucg u
  || | ||||    || |||    ||| |||     ||||||  ||||  ||||  |||||| ||||    | |||  
  cu u agag    ug ucc    agg cgA     UGAACU  GAAA  UCAU  Uuuaaa uguu    g agc g
ua  g a    uuuu  g   -gaa   a   ----C      UG    UA    AA      u    --ac c   g 


Annotation confidence Not enough data
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Genome context
NW_004581684.1: 1447320-1447465 [-]

Database links

Mature bmo-miR-3355

Accession MIMAT0015541
Description Bombyx mori bmo-miR-3355 mature miRNA
Sequence 94 - UAAUACUAUAAAGGUUCAAGUCA - 116
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415