Stem-loop bmo-mir-3355

Accession

MI0014415

Description

Bombyx mori bmo-mir-3355 precursor miRNA

Sequence

3955 reads, 59.0 reads per million, 32 experiments

gagaaucucuauuaugaggagaguucaguuuuaaaauuugaaacuuucaguagaauuUUACAGCAAACUUCGAUGGCGACGCauuguuaaauuUAAUACUAUAAAGGUUCAAGUCAgcaggaaagccugguuuuugagaaugucau
((.(.((((....((.(((....(((.(((.....((((((..((((.((((((((((.((((....(.(((....))).)..)))).))))))..))))..))))..)))))).))).)))...))).))....)))).).))..

Structure

--  g a    uauu  g   agag   a   uuaaa      aa    -c    --      U    CAAA U   A 
  ga a ucuc    au agg    uuc guu     auuuga  cuuu  agua  gaauuU ACAG    C UCG U
  || | ||||    || |||    ||| |||     ||||||  ||||  ||||  |||||| ||||    | |||  
  cu u agag    ug ucc    agg cgA     UGAACU  GAAA  UCAU  Uuuaaa uguu    G AGC G
ua  g a    uuuu  g   -gaa   a   ----C      UG    UA    AA      u    --aC C   G 

Annotation confidence Low

Genome context

dbj|BSVE01000011.1|: 1514134-1514279 [-]

Mature bmo-miR-3355-5p

• Accession: MIMAT0053278
• Description: Bombyx mori bmo-miR-3355-5p mature miRNA
• Sequence: 58 - UUACAGCAAACUUCGAUGGCGACGC - 82
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3355-3p

• Accession: MIMAT0015541
• Description: Bombyx mori bmo-miR-3355-3p mature miRNA
• Sequence: 94 - UAAUACUAUAAAGGUUCAAGUCA - 116
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415