miRBase entry: bmo-mir-3355

Dead hairpin entry

Stem-loop bmo-mir-3355


Accession
MI0014415
Description
Bombyx mori bmo-mir-3355 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

3955 reads, 59.0 reads per million, 32 experiments
gagaaucucuauuaugaggagaguucaguuuuaaaauuugaaacuuucaguagaauuUUACAGCAAACUUCGAUGGCGACGCauuguuaaauuUAAUACUAUAAAGGUUCAAGUCAgcaggaaagccugguuuuugagaaugucau
((.(.((((....((.(((....(((.(((.....((((((..((((.((((((((((.((((....(.(((....))).)..)))).))))))..))))..))))..)))))).))).)))...))).))....)))).).))..

Structure
--  g a    uauu  g   agag   a   uuaaa      aa    -c    --      U    CAAA U   A 
  ga a ucuc    au agg    uuc guu     auuuga  cuuu  agua  gaauuU ACAG    C UCG U
  || | ||||    || |||    ||| |||     ||||||  ||||  ||||  |||||| ||||    | |||  
  cu u agag    ug ucc    agg cgA     UGAACU  GAAA  UCAU  Uuuaaa uguu    G AGC G
ua  g a    uuuu  g   -gaa   a   ----C      UG    UA    AA      u    --aC C   G