miRBase entry: bmo-mir-3372

Stem-loop bmo-mir-3372


Accession
MI0014433
Description
Bombyx mori bmo-mir-3372 precursor miRNA


Sequence

13 reads, 5 reads per million, 3 experiments
aacucauuuguuUUUAUUAUGUUCUUGGCGUCAGAGCCAAAugauuuuuuguuuacaauaauuugagccuauCGCCAAGCUAUUUUAAGCAAUGAc
...(((((.((((.....(((..(((((((..((.(((((((..................))))).))))..))))))).)))...))))))))).

Structure
aac     u    UUAUU   UU       UC  A  -     gauuuuuu 
   ucauu guuU     AUG  CUUGGCG  AG GC CAAAu        g
   ||||| ||||     |||  |||||||  || || |||||         
   AGUAA CGAA     UAU  GAACCGC  uc cg guuua        u
--c     -    --UUU   -C       ua  -  a     auaacauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004603817.1: 281-376 [-]

Database links

Mature bmo-miR-3372-5p

Accession MIMAT0015559
Description Bombyx mori bmo-miR-3372-5p mature miRNA
Sequence 13 - UUUAUUAUGUUCUUGGCGUCAGAGCCAAA - 41
Evidence experimental
SOLID [1]

Mature bmo-miR-3372-3p

Accession MIMAT0015560
Description Bombyx mori bmo-miR-3372-3p mature miRNA
Sequence 73 - CGCCAAGCUAUUUUAAGCAAUGA - 95
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415