Stem-loop bmo-mir-3373

Accession

MI0014434

Description

Bombyx mori bmo-mir-3373 precursor miRNA

Sequence

24498 reads, 492.0 reads per million, 26 experiments

auaggugagcaauaUAGCCGCAGAACUGUUCGGGCAUGccccucaaccucagcaauucgacaagugccucgugagacacagugucgaaugccuuggcgAAGUCUAGCACCGCCACGUGACAUUcccgcagcuucuuccugcuaucccca
...((..((((....(((.((.(((.(((((((((.(((..((...((...(((.(((((((.(((.((....)).)))..))))))))))...))...))....)))..))).)).)))))))..)).)))......))))..))...

Structure

aua  ug    --auaU   C  -A   C    -  -   -A   --cc  caa  uca   a       -a   c  c 
   gg  agca      AGC GC  GAA UGUU CG GGC  UGc    cu   cc   gca uucgaca  gug cu g
   ||  ||||      ||| ||  ||| |||| || |||  |||    ||   ||   ||| |||||||  ||| ||  
   cc  ucgu      ucg cg  cUU ACAG GC CCG  ACG    GA   gg   cgu aagcugu  cac ga u
acc  ua    ccuucu   a  cc   -    U  A   CC   AUCU  Agc  uuc   -       ga   a  g 

Annotation confidence Medium

Genome context

dbj|BSVE01000011.1|: 4424790-4424938 [-]

Mature bmo-miR-3373-5p

• Accession: MIMAT0015561
• Description: Bombyx mori bmo-miR-3373-5p mature miRNA
• Sequence: 15 - UAGCCGCAGAACUGUUCGGGCAUG - 38
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3373-3p

• Accession: MIMAT0015562
• Description: Bombyx mori bmo-miR-3373-3p mature miRNA
• Sequence: 99 - AAGUCUAGCACCGCCACGUGACAUU - 123
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415