Stem-loop bmo-mir-3375

Accession

MI0014436

Description

Bombyx mori bmo-mir-3375 precursor miRNA

Sequence

1602 reads, 34.0 reads per million, 31 experiments

uguguuuguucagguccccagcuccauguguaauucuucuugguuAGUCGAGUAAGCGGUUCUGCUaucuuUGAAAAGUUUGGAAUAAACUUCCUGAACcaagagcaug
.(((((((((((((........((((.....((((.(((..((.((((.(((.......))).)))).))..))).))))))))........)))))))...)))))).

Structure

u      ---       uccccagc    ugugu    c   uu  u    C   UA 
 guguuu   guucagg        ucca     aauu uuc  gg uAGU GAG  A
 ||||||   |||||||        ||||     |||| |||  || |||| |||  G
 uacgag   CAAGUCC        AGGU     UUGA AAG  uc aUCG CUU  C
g      aac       UUCAAAUA    -----    A   Uu  u    U   GG 

Annotation confidence Low

Genome context

dbj|BSVE01000023.1|: 18219037-18219145 [+]

Mature bmo-miR-3375-5p

• Accession: MIMAT0015565
• Description: Bombyx mori bmo-miR-3375-5p mature miRNA
• Sequence: 46 - AGUCGAGUAAGCGGUUCUGCU - 66
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3375-3p

• Accession: MIMAT0015566
• Description: Bombyx mori bmo-miR-3375-3p mature miRNA
• Sequence: 72 - UGAAAAGUUUGGAAUAAACUUCCUGAAC - 99
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415