Stem-loop bmo-mir-3377

Accession

MI0014438

Description

Bombyx mori bmo-mir-3377 precursor miRNA

Literature search

1 open access papers mention bmo-mir-3377
(1 sentences)

Sequence

7258 reads, 120.0 reads per million, 34 experiments

cuggggauauuuaaaUGAAGUUAUGAAGUCAGGAUAcguaaauuuacgucuUAUCCUUUCAUAGGUUCUUGAUUUGUAaccg
..((..(((..(....(((.(((((((...((((((((((....)))))...)))))))))))).)))...)..)))..)).

Structure

cu  gg   uu aaaU   G       GUC     ---     a 
  gg  aua  u    GAA UUAUGAA   AGGAU   Acgua a
  ||  |||  |    ||| |||||||   |||||   |||||  
  cc  UGU  A    CUU GAUACUU   UCCUA   ugcau u
-g  aA   UU -GUU   G       ---     Uuc     u 

Annotation confidence Low

Genome context

dbj|BSVE01000014.1|: 10600415-10600496 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-3377

Mature bmo-miR-3377-5p

• Accession: MIMAT0015567
• Description: Bombyx mori bmo-miR-3377-5p mature miRNA
• Sequence: 16 - UGAAGUUAUGAAGUCAGGAUA - 36
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3377-3p

• Accession: MIMAT0015568
• Description: Bombyx mori bmo-miR-3377-3p mature miRNA
• Sequence: 52 - UAUCCUUUCAUAGGUUCUUGAUUUGUA - 78
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415