Stem-loop bmo-mir-3378

Accession

MI0014439

Description

Bombyx mori bmo-mir-3378 precursor miRNA

Literature search

1 open access papers mention bmo-mir-3378
(1 sentences)

Sequence

17 reads, 4 reads per million, 3 experiments

guccuuaucUUCCAUGUUGAUCGGGGCUGCUUCgcucgcgucguccuccacgugggaucUUGCUGCUCCAAUUGUCUGGACACGcagg
.........((((((((.((.(((.((.((...))..)).)))...)).)))))))).(((((((.((((......)))))).)))))

Structure

guccuuaucUUCCAUGUUGAUCGGGGCUGCUUCgcucgcgucguccuccacgugggau     -  C    AU 
                                                          cUUGC UG UCCA  U
                                                          ||||| || ||||   
                                                          ggacG AC AGGU  G
----------------------------------------------------------     C  -    CU 

Annotation confidence Low

Genome context

NW_004589406.1: 362-449 [+]

Mature bmo-miR-3378-5p

• Accession: MIMAT0015569
• Description: Bombyx mori bmo-miR-3378-5p mature miRNA
• Sequence: 10 - UUCCAUGUUGAUCGGGGCUGCUUC - 33
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3378-3p

• Accession: MIMAT0015570
• Description: Bombyx mori bmo-miR-3378-3p mature miRNA
• Sequence: 60 - UUGCUGCUCCAAUUGUCUGGACACG - 84
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415