miRBase entry: bmo-mir-3382

Dead hairpin entry

Stem-loop bmo-mir-3382


Accession
MI0014443
Description
Bombyx mori bmo-mir-3382 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

66256 reads, 1410.0 reads per million, 32 experiments
uccgcgucguugccucuUCAAGUUUUGUGUUCUGGGUCGUgccggucgcggagcucucguauguuucguacgacgucgcuucuguugccuccggacuggauucuUGAACCGCAGGUUCGAGUGGC
.((((.(((..(((((((((((..((..((.(((((.......(((.(((((((.((((((((...))))))).)..)).))))).))))))))))..))..))))))..).)))).))))))).

Structure
u    g   uu    - --      UU  GU  U     UCGUgcc   c     -  -u -       u 
 ccgc ucg  gccu c  uUCAAG  UU  GU CUGGG       ggu gcgga gc  c ucguaug  
 |||| |||  |||| |  ||||||  ||  || |||||       ||| ||||| ||  | ||||||| u
 GGUG AGC  UGGA G  AAGUuc  ag  ca ggccu       ccg ugucu cg  g agcaugc  
C    -   -U    C CC      uu  gu  -     -------   u     u  cu c       u