Stem-loop bmo-mir-3383

Accession

MI0014444

Description

Bombyx mori bmo-mir-3383 precursor miRNA

Sequence

6449 reads, 158.0 reads per million, 29 experiments

gaaauagugccugagggcuucGUCCAUGUUCGCGUCGGCCGUCGUCgcgugugcCACGAAGUUGACGCGCUGUCUCUU
((.(((((((.....((((((((....((.((((.((((....)))))))).)).))))))))...))))))).))..

Structure

--  a       cugag        CCAU  U    U    C 
  ga auagugc     ggcuucGU    GU CGCG CGGC G
  || |||||||     ||||||||    || |||| ||||  
  CU UGUCGCG     UUGAAGCA    cg gugc gCUG U
UU  C       --CAG        ---C  u    -    C 

Annotation confidence Low

Genome context

dbj|BSVE01000030.1|: 604519-604596 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-3383

Mature bmo-miR-3383-5p

• Accession: MIMAT0015577
• Description: Bombyx mori bmo-miR-3383-5p mature miRNA
• Sequence: 22 - GUCCAUGUUCGCGUCGGCCGUCGUC - 46
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3383-3p

• Accession: MIMAT0015578
• Description: Bombyx mori bmo-miR-3383-3p mature miRNA
• Sequence: 55 - CACGAAGUUGACGCGCUGUCUCUU - 78
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415