miRBase entry: bmo-mir-3384

Dead hairpin entry

Stem-loop bmo-mir-3384


Accession
MI0014445
Description
Bombyx mori bmo-mir-3384 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
1 open access papers mention bmo-mir-3384
(2 sentences)

Sequence

125966 reads, 2592.0 reads per million, 33 experiments
augaaauguguccucuauccggcucgaauggaccaugaaauguacaCGACCCGGUCUGUAUGGCUGuuuccgagucguguaauaauauuuucUGCUGUCUGUUUGUGCGCUGGUAgaagacggcuguuucu
..((((((((((.((((.(((((.(((((((((((.((((((((((((((.(((...............))).)))))))....))))))).))..)))))))))...))))))))).))).)).))))).

Structure
au     -  -   c    u     --u         --  u       ----       C   UCUGUA 
  gaaau gu guc ucua ccggc   cgaauggac  ca gaaaugu    acaCGAC CGG      U
  ||||| || ||| |||| |||||   |||||||||  || |||||||    ||||||| |||      G
  cuuug cg cag agAU GGUCG   GUUUGUCUG  GU uuuuaua    ugugcug gcc      G
-u     u  g   a    -     CGU         UC  c       auaa       a   uuuGUC