Stem-loop bmo-mir-3384

Accession

MI0014445

Description

Bombyx mori bmo-mir-3384 precursor miRNA

Literature search

1 open access papers mention bmo-mir-3384
(2 sentences)

Sequence

125966 reads, 2592.0 reads per million, 33 experiments

augaaauguguccucuauccggcucgaauggaccaugaaauguacaCGACCCGGUCUGUAUGGCUGuuuccgagucguguaauaauauuuucUGCUGUCUGUUUGUGCGCUGGUAgaagacggcuguuucu
..((((((((((.((((.(((((.(((((((((((.((((((((((((((.(((...............))).)))))))....))))))).))..)))))))))...))))))))).))).)).))))).

Structure

au     -  -   c    u     --u         --  u       ----       C   UCUGUA 
  gaaau gu guc ucua ccggc   cgaauggac  ca gaaaugu    acaCGAC CGG      U
  ||||| || ||| |||| |||||   |||||||||  || |||||||    ||||||| |||      G
  cuuug cg cag agAU GGUCG   GUUUGUCUG  GU uuuuaua    ugugcug gcc      G
-u     u  g   a    -     CGU         UC  c       auaa       a   uuuGUC 

Annotation confidence Low

Genome context

dbj|BSVE01000030.1|: 5985867-5985997 [+]

Mature bmo-miR-3384-5p

• Accession: MIMAT0015579
• Description: Bombyx mori bmo-miR-3384-5p mature miRNA
• Sequence: 47 - CGACCCGGUCUGUAUGGCUG - 66
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3384-3p

• Accession: MIMAT0015580
• Description: Bombyx mori bmo-miR-3384-3p mature miRNA
• Sequence: 93 - UGCUGUCUGUUUGUGCGCUGGUA - 115
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415