miRBase entry: bmo-mir-3388

Dead hairpin entry

Stem-loop bmo-mir-3388


Accession
MI0014449
Description
Bombyx mori bmo-mir-3388 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

19567 reads, 472.0 reads per million, 26 experiments
uuaucuucgcacgcugacaagucaaacaugccuuggcccauucacggcaguUCUUACGCAUCAGUGGCCAAACGAAgcguugcgcaacgaguuuagcugUCGCAUUGGGACCUGGAUGACUGAGcgaguggaggc
...(((((((.((((..((.((((..((......((((((....(((((((((((((((.((.((......)))).))))........)))...))))))))...)))).))))..)))))))))).))))))).

Structure
uua       a    ga  a    aa  ugccuu  -    uuca        ---   --------    A  A  GG 
   ucuucgc cgcu  ca guca  ca      gg ccca    cggcaguU   CUU        ACGC UC GU  C
   ||||||| ||||  || ||||  ||      || ||||    ||||||||   |||        |||| || ||   
   ggaggug gcGA  GU CAGU  GU      CC GGGU    GCUgucga   gag        ugcg AG CA  C
--c       a    --  -    AG  ------  A    -UAC        uuu   caacgcgu    A  -  AA