miRBase entry: bmo-mir-3391

Dead hairpin entry

Stem-loop bmo-mir-3391


Accession
MI0014454
Description
Bombyx mori bmo-mir-3391 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

10684 reads, 232.0 reads per million, 34 experiments
aggUCGUGGUAUUUCGUACCUUCAUGGCUCaguacugugcgaacggauuguuguucgucgauccguccccgguguggugcugugacaaaAAGUGAUGUGAGUCCGUCGAG
...((((((..((.(((..((((((((((((.(((((.(.(.((((((((........)))))))).)))))))))).))))))).....))..))).))..))).))).

Structure
agg   -   UA  U   AC  -----       -   g     u c a        uug 
   UCG UGG  UU CGU  CU     UCAUGGC UCa uacug g g acggauug   u
   ||| |||  || |||  ||     ||||||| ||| ||||| | | ||||||||    
   AGC GCC  AG GUA  GA     agugucg ggu guggc c c ugccuagc   u
--G   U   UG  U   GU  Aaaac       u   -     - - c        ugc