Stem-loop bmo-mir-3393

Accession

MI0014456

Description

Bombyx mori bmo-mir-3393 precursor miRNA

Sequence

cgaacguuugUAGGAGGAGAUUUAUCUGGAUAAuucgucgauucagucaauaggucgauuuucuaacgagaagacaaauacuaauuaaucgauauacgaauuagcauaaaaucgauuuuugcaaaua
.....(((((((((((..(((((...((..(((((((((((((..........(((..(((((....))))))))...........))))))....))))))).))..)))))..))))))))))).

Structure

cgaac           GA     AUC  GA       ----      -cagucaauag   ga     u 
     guuugUAGGAG  GAUUU   UG  UAAuucg    ucgauu           guc  uuuuc a
     |||||||||||  |||||   ||  |||||||    ||||||           |||  |||||  
     uaaacguuuuu  cuaaa   ac  auuaagc    agcuaa           cag  aagag a
----a           ag     -au  -g       auau      uuaaucauaaa   --     c 

Annotation confidence Low

Genome context

NW_004581740.1: 686617-686743 [+]

Mature bmo-miR-3393

• Accession: MIMAT0015597
• Description: Bombyx mori bmo-miR-3393 mature miRNA
• Sequence: 11 - UAGGAGGAGAUUUAUCUGGAUAA - 33
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415