miRBase entry: bmo-mir-3396

Dead hairpin entry

Stem-loop bmo-mir-3396


Accession
MI0014459
Description
Bombyx mori bmo-mir-3396 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

5358 reads, 126.0 reads per million, 29 experiments
uucggauccuucUCCAGUUUCUAUUUCACGGACGUCAggcgauuuaaugcggcuucaaaguuguugggcaucuucggguucuccucuccucuccccgcagugcggUCUCGUAGCGGCCGUCGGGUcguugcuggguggaauccc
...((((((...((((((.........((((((..((.(((.......((((((....)))))).(((.......(((....))).......))))))..))..))).)))(((((((....))))))))))))).)).)))).

Structure
uuc    -  uuc      ---------UUCUAUUUC   -   GU  -g   auuuaaugcggcuucaaaguuguugg 
   ggau cc   UCCAGU                  ACG GAC  CA  gcg                          g
   |||| ||   ||||||                  ||| |||  ||  |||                           
   ccua gg   gggucg                  UGC CUg  gu  cgc                          c
--c    a  --u      uugcUGGGCUGCCGGCGA   U   gc  ga   cccucuccucuccucuugggcuucua