Stem-loop bmo-mir-3399

Accession

MI0014462

Description

Bombyx mori bmo-mir-3399 precursor miRNA

Sequence

9372 reads, 216.0 reads per million, 33 experiments

uuucaaUAUCUACAUUGAAUACCUGGCUAUGaggcguugucucgaccugggucucgcuggauGUGCUUGGUUCUGUAUAUAUUCGAC
..(((((((.((((..((..(((.((((((..((((..(.(((.....))).).))))..))).))).))))))))).))))).)).

Structure

uu  -     C    UU  AU   U   -   Ga    uu u   g 
  uc aaUAU UACA  GA  ACC GGC UAU  ggcg  g cuc a
  || ||||| ||||  ||  ||| ||| |||  ||||  | ||| c
  AG UUAUA AUGU  CU  UGG UCG Gua  ucgc  c ggg c
-C  C     U    --  --   U   U   gg    -u u   u 

Annotation confidence Medium

Genome context

dbj|BSVE01000020.1|: 8508995-8509081 [-]

Mature bmo-miR-3399-5p

• Accession: MIMAT0015603
• Description: Bombyx mori bmo-miR-3399-5p mature miRNA
• Sequence: 7 - UAUCUACAUUGAAUACCUGGCUAUG - 31
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3399-3p

• Accession: MIMAT0053284
• Description: Bombyx mori bmo-miR-3399-3p mature miRNA
• Sequence: 63 - GUGCUUGGUUCUGUAUAUAUUCGAC - 87
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415