miRBase entry: bmo-mir-3403

Dead hairpin entry

Stem-loop bmo-mir-3403


Accession
MI0014466
Description
Bombyx mori bmo-mir-3403 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

18829 reads, 361.0 reads per million, 34 experiments
gcaagcggacuUCUCUGGCUUCGUCUGAUUCUGAGUCCcggaucucagcccuggaaugacgcacuugcugcaaacaugaugaugcugaaauaguguucUGAAUCUAGUCUGAAGUCUGAUUUGg
.((((((((((((.((((.((((((((...(((((........)))))...))))..((.(((((..(.(((..........))).)....))))))))))).))))...)))))))).)))).

Structure
g    -        --U    C    -------------------------------------------    AUU     UCC 
 caag cggacuUC   CUGG UUCG                                           UCUG   CUGAG   c
 |||| ||||||||   |||| ||||                                           ||||   |||||    
 GUUU GUCUGAAG   GAUC AAGU                                           aggu   gacuc   g
g    A        UCU    U    cuugugauaaagucguaguaguacaaacgucguucacgcagua    ccc     uag