Stem-loop bmo-mir-3403

Accession

MI0014466

Description

Bombyx mori bmo-mir-3403 precursor miRNA

Sequence

452 reads, 62 reads per million, 3 experiments

gcaagcggacuucucuggcuucgucugauucugagucccggaucucagcccuggaaugacgcacuugcugcaaacaugaugaugcugaaauaguguucUGAAUCUAGUCUGAAGUCUGAUUUGg
.((((((((((((.((((.((((((((...(((((........)))))...))))..((.(((((..(.(((..........))).)....))))))))))).))))...)))))))).)))).

Structure

g    -        --u    c    ucugauucugagucccggaucucagcccuggaau  c     --ug u   aaca 
 caag cggacuuc   cugg uucg                                  ga gcacu    c gca    u
 |||| ||||||||   |||| ||||                                  || |||||    | |||     
 GUUU GUCUGAAG   GAUC AAGU                                  cu uguga    g cgu    g
g    A        UCU    U    ----------------------------------  -     uaaa u   agua 

Annotation confidence Low

Genome context

NW_004581799.1: 393613-393736 [+]

Mature bmo-miR-3403

• Accession: MIMAT0015607
• Description: Bombyx mori bmo-miR-3403 mature miRNA
• Sequence: 99 - UGAAUCUAGUCUGAAGUCUGAUUUG - 123
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415