miRBase entry: bmo-mir-3403

Stem-loop bmo-mir-3403


Accession
MI0014466
Description
Bombyx mori bmo-mir-3403 precursor miRNA


Sequence

511 reads, 103 reads per million, 3 experiments
gcaagcggacuucucuggcuucgucugauucugagucccggaucucagcccuggaaugacgcacuugcugcaaacaugaugaugcugaaauaguguucUGAAUCUAGUCUGAAGUCUGAUUUGg
.((((((((((((.((((.((((((((...(((((........)))))...))))..((.(((((..(.(((..........))).)....))))))))))).))))...)))))))).)))).

Structure
g    -        --u    c    ucugauucugagucccggaucucagcccuggaau  c     --ug u   aaca 
 caag cggacuuc   cugg uucg                                  ga gcacu    c gca    u
 |||| ||||||||   |||| ||||                                  || |||||    | |||     
 GUUU GUCUGAAG   GAUC AAGU                                  cu uguga    g cgu    g
g    A        UCU    U    ----------------------------------  -     uaaa u   agua 


Annotation confidence Not enough data
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Genome context
NW_004581799.1: 393613-393736 [+]

Database links

Mature bmo-miR-3403

Accession MIMAT0015607
Description Bombyx mori bmo-miR-3403 mature miRNA
Sequence 99 - UGAAUCUAGUCUGAAGUCUGAUUUG - 123
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415