miRBase entry: bmo-mir-3403

Stem-loop bmo-mir-3403


Accession
MI0014466
Description
Bombyx mori bmo-mir-3403 precursor miRNA


Sequence

18829 reads, 361.0 reads per million, 34 experiments
gcaagcggacuUCUCUGGCUUCGUCUGAUUCUGAGUCCcggaucucagcccuggaaugacgcacuugcugcaaacaugaugaugcugaaauaguguucUGAAUCUAGUCUGAAGUCUGAUUUGg
.((((((((((((.((((.((((((((...(((((........)))))...))))..((.(((((..(.(((..........))).)....))))))))))).))))...)))))))).)))).

Structure
g    -        --U    C    -------------------------------------------    AUU     UCC 
 caag cggacuUC   CUGG UUCG                                           UCUG   CUGAG   c
 |||| ||||||||   |||| ||||                                           ||||   |||||    
 GUUU GUCUGAAG   GAUC AAGU                                           aggu   gacuc   g
g    A        UCU    U    cuugugauaaagucguaguaguacaaacgucguucacgcagua    ccc     uag 


Annotation confidence Low
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Genome context
dbj|BSVE01000020.1|: 8248025-8248148 [+]

Database links

Mature bmo-miR-3403-5p

Accession MIMAT0053286
Description Bombyx mori bmo-miR-3403-5p mature miRNA
Sequence 12 - UCUCUGGCUUCGUCUGAUUCUGAGUCC - 38
Evidence experimental
SOLID [1]

Mature bmo-miR-3403-3p

Accession MIMAT0015607
Description Bombyx mori bmo-miR-3403-3p mature miRNA
Sequence 99 - UGAAUCUAGUCUGAAGUCUGAUUUG - 123
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415