miRBase entry: bmo-mir-3347b

Stem-loop bmo-mir-3347b


Accession
MI0014467
Description
Bombyx mori bmo-mir-3347b precursor miRNA


Sequence

1353 reads, 30.0 reads per million, 27 experiments
acuugugggaccuguucuguUCAGUAUGUAUGCGGCGGUAUUAAUgagcucugcccauagcacuugcgguaauggcucaugagcgUACAUCAUUGAUCUUGCUAUCUCCg
.......(((...((.....(((((((((((((..........(((((((.((((((.......)).))))..)))))))..)))))))).)))))....))....))).

Structure
acuugug   -ccu  ucugu     -        GGCGGUAUUA       -c    -  ua 
       gga    gu     UCAGU AUGUAUGC          AUgagcu  ugcc ca  g
       |||    ||     ||||| ||||||||          |||||||  |||| ||  c
       CCU    CG     AGUUA UACAUgcg          uacucgg  augg gu  a
------g   CUAU  -UUCU     C        --------ag       ua    c  uc 


Annotation confidence Low
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Genome context
dbj|BSVE01000020.1|: 8417870-8417979 [+]

Database links

Mature bmo-miR-3347b-5p

Accession MIMAT0053287
Description Bombyx mori bmo-miR-3347b-5p mature miRNA
Sequence 21 - UCAGUAUGUAUGCGGCGGUAUUAAU - 45
Evidence experimental
SOLID [1]

Mature bmo-miR-3347b-3p

Accession MIMAT0015608
Description Bombyx mori bmo-miR-3347b-3p mature miRNA
Sequence 86 - UACAUCAUUGAUCUUGCUAUCUCC - 109
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415