miRBase entry: bmo-mir-3404

Dead hairpin entry

Stem-loop bmo-mir-3404


Accession
MI0014468
Description
Bombyx mori bmo-mir-3404 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

6565 reads, 135.0 reads per million, 34 experiments
ugaaagacauuguuuuuacauucccaucgucacaauauuuaguguaaaugcgguaaagauUUGAAAUGUUUUUAAACUCACUUGGuaaauaaagucgaguUGAAUCUUUUCUGCAAUAGUGUGACgguacuaaaggcaguaacuua
...(((..((((((((((.......(((((((((.(((..........(((((.((((((((............(((((((((........)))).))))))))))))).)))))))).)))))))))..))))))))))..))).

Structure
uga   ac          cauuccc         a   uuaguguaaa     u        GAAAUGUUUUUA     -    GGu 
   aag  auuguuuuua       aucgucaca uau          ugcgg aaagauUU            AACUC ACUU   a
   |||  ||||||||||       ||||||||| |||          ||||| ||||||||            ||||| ||||    
   uuc  ugacggaaau       uggCAGUGU AUA          ACGUC UUUCUAAG            Uugag ugaa   a
--a   aa          -----ca         G   ----------     U        ------------     c    aua