Stem-loop bmo-mir-3414

Accession

MI0014478

Description

Bombyx mori bmo-mir-3414 precursor miRNA

Sequence

9821 reads, 154.0 reads per million, 34 experiments

aaagauUCCUUAAGUUUUUUGAACGCAGUGUcggccucaucuguccacuggaagggagguguugauuUUUUGUUCGAUGUCAACCUAUUAAGcggcccug
..((..((((((((((..(((((((.((.(((((((((.(((.(((...)))))))))))..)))).)).)))))))....)))...))))).))..)).

Structure

aa  au  -     ---   --UU       C  U    --     a   g   a 
  ag  UC CUUAA   GUU    UUGAACG AG GUcg  gccuc ucu ucc  
  ||  || |||||   |||    ||||||| || ||||  ||||| ||| ||| c
  uc  gg GAAUU   CAA    AGCUUGU UU uagu  uggag gga agg  
-g  cc  c     AUC   CUGU       U  u    ug     -   -   u 

Annotation confidence Medium

Genome context

dbj|BSVE01000030.1|: 2648267-2648366 [-]

Mature bmo-miR-3414-5p

• Accession: MIMAT0015620
• Description: Bombyx mori bmo-miR-3414-5p mature miRNA
• Sequence: 7 - UCCUUAAGUUUUUUGAACGCAGUGU - 31
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3414-3p

• Accession: MIMAT0015621
• Description: Bombyx mori bmo-miR-3414-3p mature miRNA
• Sequence: 68 - UUUUGUUCGAUGUCAACCUAUUAAG - 92
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415