miRBase entry: bmo-mir-3414

Stem-loop bmo-mir-3414


Accession
MI0014478
Description
Bombyx mori bmo-mir-3414 precursor miRNA


Sequence

49 reads, 13 reads per million, 3 experiments
aaagauUCCUUAAGUUUUUUGAACGCAGUGucggccucaucuguccacuggaagggagguguUGAUUUUUUGUUCGAUGUCAACCUAuuaagcggcccug
..((..((((((((((..(((((((.((.(((((((((.(((.(((...)))))))))))..)))).)).)))))))....)))...))))).))..)).

Structure
aa  au  -     ---   --UU       C  U    --     a   g   a 
  ag  UC CUUAA   GUU    UUGAACG AG Gucg  gccuc ucu ucc  
  ||  || |||||   |||    ||||||| || ||||  ||||| ||| ||| c
  uc  gg gaauu   CAA    AGCUUGU UU UAGU  uggag gga agg  
-g  cc  c     AUC   CUGU       U  U    ug     -   -   u 


Annotation confidence Not enough data
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Genome context
NW_004581707.1: 1075363-1075462 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-3414
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-3414-5p

Accession MIMAT0015620
Description Bombyx mori bmo-miR-3414-5p mature miRNA
Sequence 7 - UCCUUAAGUUUUUUGAACGCAGUG - 30
Evidence experimental
SOLID [1]
Database links

Mature bmo-miR-3414-3p

Accession MIMAT0015621
Description Bombyx mori bmo-miR-3414-3p mature miRNA
Sequence 63 - UGAUUUUUUGUUCGAUGUCAACCUA - 87
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415