miRBase entry: bmo-mir-3420

Dead hairpin entry

Stem-loop bmo-mir-3420


Accession
MI0014485
Description
Bombyx mori bmo-mir-3420 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

9543 reads, 201.0 reads per million, 32 experiments
agcgaUCAGAAUUUACUGUUAUUGCCUGGCCUcgcucauuuucgaagaaaugggguccgaugauucuaugagccgacauggccgcccAAACCGUAACUUUAAGCGAAUGCA
.(((.((.(((.((((.(((...((..((((((((((((............((((((....))))))))))).)))...))))))...))).)))).)))....)).))).

Structure
a   a  ---A   U    U   AUU  CU    ---   -     uuucgaagaaau      c 
 gcg UC    GAA UUAC GUU   GC  GGCC   Ucg cucau            gggguc g
 ||| ||    ||| |||| |||   ||  ||||   ||| |||||            ||||||  
 CGU AG    UUU AAUG CAA   cg  ccgg   agc gagua            ucuuag a
A   A  CGAA   C    C   Acc  --    uac   c     ------------      u