miRBase entry: bmo-mir-3422

Stem-loop bmo-mir-3422


Accession
MI0014487
Description
Bombyx mori bmo-mir-3422 precursor miRNA


Sequence

uagguggcagacgagaaUGGAUCUACUGUGAAGGACUGAGaauauauauucccgaucugauuaacagauagauucugauuaaugcuuuuguugcugucg
.....(((((((((((..(((((((((((...(((.((.((((....)))).)).))).....)))).)))))))..........))))))..))))).

Structure
uaggu     --      --------aU       -    --GAA   C  A    a 
     ggcag  acgaga          GGAUCUA CUGU     GGA UG Gaau u
     |||||  ||||||          ||||||| ||||     ||| || ||||  
     cuguc  uguuuu          cuuagau gaca     ucu gc cuua a
----g     gu      cguaauuagu       a    auuag   a  c    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004581682.1: 80279-80377 [+]

Database links

Mature bmo-miR-3422

Accession MIMAT0015630
Description Bombyx mori bmo-miR-3422 mature miRNA
Sequence 18 - UGGAUCUACUGUGAAGGACUGAG - 40
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415