miRBase entry: bmo-mir-3423

Stem-loop bmo-mir-3423


Accession
MI0014488
Description
Bombyx mori bmo-mir-3423 precursor miRNA


Sequence

10 reads, 1 reads per million, 3 experiments
uccaccacccacauuaaUACUUUAGGUCUAUUGCAUGAUAAAugcgaaaauuauuauuauuuuuugcggguuugauuuuuauuacaugaugcuauuuauugaucguggaaggguc
....((..(((((((((((...((((((...((..(((((((((((((((.((....)).)))))))).........))))))))).))).)))..))))))).))))..))...

Structure
ucca  ac    -       CUU   -   UAU  CA       ---------        u  u 
    cc  ccac auuaaUA   UAG GUC   UG  UGAUAAA         ugcgaaaa ua u
    ||  |||| |||||||   ||| |||   ||  |||||||         |||||||| ||  
    gg  ggug uaguuau   auc uag   ac  auuauuu         gcguuuuu au a
-cug  aa    c       -uu   g   --u  --       uuaguuugg        u  u 


Annotation confidence Not enough data
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Genome context
NW_004581682.1: 547848-547962 [-]

Database links

Mature bmo-miR-3423

Accession MIMAT0015631
Description Bombyx mori bmo-miR-3423 mature miRNA
Sequence 18 - UACUUUAGGUCUAUUGCAUGAUAAA - 42
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415