miRBase entry: bmo-mir-3428

Stem-loop bmo-mir-3428


Accession
MI0014493
Description
Bombyx mori bmo-mir-3428 precursor miRNA


Sequence


cuaguuuuuaaucuuacugcUCAGACGUGUCAUUUUUCCUAUUAaggugaaacuugaacaauaacucgggaagagcuguugcgcuuugaggaagguuuaugacuu
..((((...(((((...(.(((((((((..((((((((((.(((((......)))))..........)))))))).))..))).)))))).))))))...)))).

Structure
cu    uuu     uac g      -   GU  -        ---------A     gu 
  aguu   aaucu   u cUCAGA CGU  CA UUUUUCCU          UUAag  g
  ||||   |||||   | |||||| |||  || ||||||||          |||||   
  ucag   uugga   a gaguuu gcg  gu gagaaggg          aguuc  a
-u    uau     --- g      c   uu  c        cucaauaaca     aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
dbj|BSVE01000004.1|: 522001-522105 [-]

Database links

Mature bmo-miR-3428-5p

Accession MIMAT0015636
Description Bombyx mori bmo-miR-3428-5p mature miRNA
Sequence 21 - UCAGACGUGUCAUUUUUCCUAUUA - 44
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415