Accession
MI0014678
Description
Ectocarpus siliculosus
esi-MIR3454b precursor miRNA
Sequence
gcucguggaguuuUUCCCAGCUCCGACGGGAUGGcgcucgugacuagguccgccgccuuguaucacacgagcguguguauaucugugcgacucaaggcggcggaacuagucacgagcgccCUUCCGUCGGAGCUGGGUAGAauuucacgagc
((((((((((((((.((((((((((((((((.(((((((((((((((.((((((((((((..((.(((((...........)).))).))..)))))))))))).))))))))))))))).)))))))))))))))).))))))))))))))
((((((((((((((.((((((((((((((((.(((((((((((((((.((((((((((((..((.(((((...........)).))).))..)))))))))))).))))))))))))))).)))))))))))))))).))))))))))))))
Structure
U U g ua a - gcgu
gcucguggaguuuU CCCAGCUCCGACGGGA GGcgcucgugacuag uccgccgccuug uc cac ga g
|||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||| || ||| || u
cgagcacuuuaAGA GGGUCGAGGCUGCCUU ccgcgagcacugauc aggcggcggaac ag gug cu g
U C a uc c u auau
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
sctg_168: 252803-252954 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from esi-MIR3454b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature esi-miR3454b-5p
| Accession | MIMAT0017759 |
| Description | Ectocarpus siliculosus esi-miR3454b-5p mature miRNA |
| Sequence | 14 - UUCCCAGCUCCGACGGGAUGG - 34 |
| Evidence |
experimental
Illumina [1] |
Mature esi-miR3454b-3p
| Accession | MIMAT0017760 |
| Description | Ectocarpus siliculosus esi-miR3454b-3p mature miRNA |
| Sequence | 121 - CUUCCGUCGGAGCUGGGUAGA - 141 |
| Evidence |
experimental
Illumina [1] |
References
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