Stem-loop esi-MIR3451

Accession

MI0014689

Description

Ectocarpus siliculosus esi-MIR3451 precursor miRNA

Sequence

ccuacugauggUUGUAGACCUUCCUGCCGCAAACaucacaugugcaaugugcauguuugcggcuggaacaagugauguUCGCGGCAGGGAGGUUCACAAccaucaguag
.((((((((((((((.((((((((((((((.((((((((.(((......((((....))))......))).)))))))).)))))))))))))).))))))))))))))

Structure

c              A              A        a   gcaaug    u 
 cuacugauggUUGU GACCUUCCUGCCGC AACaucac ugu      ugca g
 |||||||||||||| |||||||||||||| |||||||| |||      ||||  
 gaugacuaccAACA UUGGAGGGACGGCG Uuguagug aca      gcgu u
-              C              C        a   aggucg    u 

Annotation confidence Not enough data

Genome context

sctg_136: 105392-105500 [+]

Mature esi-miR3451-5p

• Accession: MIMAT0017781
• Description: Ectocarpus siliculosus esi-miR3451-5p mature miRNA
• Sequence: 12 - UUGUAGACCUUCCUGCCGCAAAC - 34
• Evidence: experimental ; Illumina [1]

Mature esi-miR3451-3p

• Accession: MIMAT0017782
• Description: Ectocarpus siliculosus esi-miR3451-3p mature miRNA
• Sequence: 79 - UCGCGGCAGGGAGGUUCACAA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621