Stem-loop aae-mir-929-2

Accession

MI0014711

Description

Aedes aegypti aae-mir-929-2 precursor miRNA

Sequence

5215 reads, 41.0 reads per million, 78 experiments

ugccuacgacugguccAAAUUGACUCUAGUAGGGAGUccuuguguacgagugaCUCCCUAACGGAGUCAGAUUGaacccgguaggaugg
..(((((....(((.(((.((((((((..(((((((((((((....)))).)))))))))..)))))))).))).)))..)))))....

Structure

--ug     gacu   c   A        AG         -    u 
    ccuac    ggu cAA UUGACUCU  UAGGGAGUc cuug g
    |||||    ||| ||| ||||||||  ||||||||| ||||  
    ggaug    cca GUU GACUGAGG  AUCCCUCag gagc u
ggua     --gc   a   A        CA         u    a 

Annotation confidence High

Genome context

ref|NW_001836586.1|: 3294-3382 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from aae-mir-929-2

Mature aae-miR-929-5p

• Accession: MIMAT0015648
• Description: Aedes aegypti aae-miR-929-5p mature miRNA
• Sequence: 17 - AAAUUGACUCUAGUAGGGAGU - 37
• Evidence: experimental ; 454 [1]

Mature aae-miR-929-3p

• Accession: MIMAT0061502
• Description: Aedes aegypti aae-miR-929-3p mature miRNA
• Sequence: 54 - CUCCCUAACGGAGUCAGAUUG - 74
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581