Stem-loop hsv2-mir-H5

Accession

MI0014713

Description

Herpes Simplex Virus 2 hsv2-mir-H5 precursor miRNA

Sequence

cucccgcuccugcGGGGGGGCUCGGGCCACCUGACCuucguaaccugcacucaggucagagccccagaccccccgcgggcgcgggag
(((((((.(((((((((((.((.((((...(((((((..((.......))..))))))).)))).)).))))))))))).)))))))

Structure

       u           G  C    CAC       uc  aa 
cucccgc ccugcGGGGGG CU GGGC   CUGACCu  gu  c
||||||| ||||||||||| || ||||   |||||||  ||  c
gagggcg gggcgcccccc ga cccg   gacugga  ca  u
       c           a  c    --a       cu  cg 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv2-miR-H5

• Accession: MIMAT0015650
• Description: Herpes Simplex Virus 2 hsv2-miR-H5 mature miRNA
• Sequence: 14 - GGGGGGGCUCGGGCCACCUGACC - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672