Stem-loop ghr-MIR3476

Accession

MI0014715

Description

Gossypium hirsutum ghr-MIR3476 precursor miRNA

Literature search

6 open access papers mention ghr-MIR3476
(11 sentences)

Sequence

uaucuugauuUGAACUGGGUUUGUUGGCUGCugaucugcuuuuuugaagcagauaucaaaucuaguuaauaaaacacuuuucaggAGCCAACAACAUCAGUUCUAAccaggacu
..(((((.((.(((((((..(((((((((.((((((((((((...)))))))))..........(((.....)))......))).)))))))))..))))))).)).)))))..

Structure

ua     a  U       GU         G   ---------------------------         u 
  ucuug uu GAACUGG  UUGUUGGCU Cug                           aucugcuuu  
  ||||| || |||||||  ||||||||| |||                           ||||||||| u
  aggac AA CUUGACU  AACAACCGA gac                           uagacgaag  
uc     c  U       AC         g   uuuucacaaaauaauugaucuaaacua         u 

Annotation confidence Low

Genome context

Unknown

Mature ghr-miR3476-5p

• Accession: MIMAT0015653
• Description: Gossypium hirsutum ghr-miR3476-5p mature miRNA
• Sequence: 11 - UGAACUGGGUUUGUUGGCUGC - 31
• Evidence: experimental ; Illumina [1]

Mature ghr-miR3476-3p

• Accession: MIMAT0015654
• Description: Gossypium hirsutum ghr-miR3476-3p mature miRNA
• Sequence: 86 - AGCCAACAACAUCAGUUCUAA - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19788742
   Enrichment of a set of microRNAs during the cotton fiber development
   Kwak PB, Wang QQ, Chen XS, Qiu CX, Yang ZM
   BMC Genomics (2009) 10:457