miRBase entry: nvi-mir-10

Stem-loop nvi-mir-10


Accession
MI0014737
Description
Nasonia vitripennis nvi-mir-10 precursor miRNA


Sequence

cccaguuaaugcucuacaucuACCCUGUAGAUCCGAAUUUGUuugaagucaggcgacaaauucgguucuagagagguuuguguggugcauacaaugcuac
........((((.((((((..(((((.((((.(((((((((((((....))...))))))))))).)))).)).)))..)))))).))))..........

Structure
--cccaguua    u      cu   -  G    U           ---  a 
          augc cuacau  ACC CU UAGA CCGAAUUUGUu   ug a
          |||| ||||||  ||| || |||| |||||||||||   ||  
          uacg ggugug  ugg ga aucu ggcuuaaacag   ac g
caucguaaca    u      uu   a  g    u           cgg  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4: 6871398-6871497 [+]

Database links

Mature nvi-miR-10

Accession MIMAT0015676
Description Nasonia vitripennis nvi-miR-10 mature miRNA
Sequence 22 - ACCCUGUAGAUCCGAAUUUGU - 42
Evidence experimental
454 [1]

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348