miRBase entry: nvi-mir-279

Stem-loop nvi-mir-279


Accession
MI0014742
Description
Nasonia vitripennis nvi-mir-279 precursor miRNA


Sequence


ccaucggacaacgaccagccgauuguacugagugagugauggucuggugcacgguuuaucgaucugUGACUAGAUCCACACUCAUUAAguacguucggcu
...(((.....)))..((((((.((((((.((((((((.(((((((((.(((((.........))))))))))).))))))))))).)))))).))))))

Structure
ccaucggacaacgacc      u      g        a   -      g     uuu 
                agccga uguacu agugagug ugg ucuggu cacgg   a
                |||||| |||||| |||||||| ||| |||||| |||||   u
                ucggcu gcaugA UUACUCAC ACC AGAUCA GUguc   c
----------------      u      A        -   U      -     uag 


Annotation confidence Not enough data
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Genome context
chr4: 11614872-11614971 [+]

Database links

Mature nvi-miR-279-3p

Accession MIMAT0015681
Description Nasonia vitripennis nvi-miR-279-3p mature miRNA
Sequence 67 - UGACUAGAUCCACACUCAUUAA - 88
Evidence experimental
454 [1]

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348