Stem-loop nvi-mir-3477

Accession

MI0014767

Description

Nasonia vitripennis nvi-mir-3477 precursor miRNA

Sequence

gguagugucuguguagguaaucucaugcgguaacugugagcgugugaaaaacuauggcuCAUAUUACCUCGUGGGAUUUCccacccacuacc
(((((((...(((..((.(((((((((.(((((.(((((((..((.....))....)))))))))))).))))))))).))))).)))))))

Structure

       ucu   ua  u         c     c       --gu  g 
gguagug   gug  gg aaucucaug gguaa ugugagc    gu a
|||||||   |||  || ||||||||| ||||| |||||||    || a
ccaucac   cac  cC UUAGGGUGC CCAUU AUACucg    ca a
       --c   --  U         U     -       guau  a 

Annotation confidence Not enough data

Genome context

GL340882.1: 830357-830448 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from nvi-mir-3477

Mature nvi-miR-3477

• Accession: MIMAT0015706
• Description: Nasonia vitripennis nvi-miR-3477 mature miRNA
• Sequence: 60 - CAUAUUACCUCGUGGGAUUUC - 80
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20075255
   Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
   "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
   "Science (2010) 327:343-348