miRBase entry: nvi-mir-3478

Stem-loop nvi-mir-3478


Accession
MI0014768
Description
Nasonia vitripennis nvi-mir-3478 precursor miRNA


Sequence

gaggcugauAUUGGAUGAAUCCUACCCGGUGAGguauuuauaauuuccuaaccaagcgggauuccacccgacagcagccu
.((((((...((((..(((((((.(..(((.(((............))).)))..).)))))))...))))...))))))

Structure
g      auA    -AU       A CC   G   uauuu 
 aggcug   UUGG   GAAUCCU C  GGU AGg     a
 ||||||   ||||   ||||||| |  ||| |||      
 uccgac   agcc   cuuaggg g  cca ucc     u
-      gac    cac       c aa   a   uuuaa 


Annotation confidence Not enough data
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Genome context
GL341018.1: 1808213-1808292 [+]

Database links

Mature nvi-miR-3478

Accession MIMAT0015707
Description Nasonia vitripennis nvi-miR-3478 mature miRNA
Sequence 10 - AUUGGAUGAAUCCUACCCGGUGAG - 33
Evidence experimental
454 [1]

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348