miRBase entry: ppy-let-7b

Stem-loop ppy-let-7b

Accession

MI0014782

Description

Pongo pygmaeus ppy-let-7b precursor miRNA

Literature search

2 open access papers mention ppy-let-7b
(5 sentences)

Sequence

cggggUGAGGUAGUAGGUUGUGUGGUUucagggcagugauguugccccucagaagauaacuauacaaccuacugccuucccug
(((((.(((((((((((((((((((((((.((((((.....)))))).......)).))))))))))))))))))))))))))

Structure

     U                     -  ------a      u 
cgggg GAGGUAGUAGGUUGUGUGGUU uc       gggcag g
||||| ||||||||||||||||||||| ||       |||||| a
guccc uuccgucauccaacauaucaa ag       cccguu u
     -                     u  aagacuc      g

Annotation confidence Not enough data

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Genome context

chr22: 41541671-41541753 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-let-7b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-let-7b

Accession	MIMAT0015722
Description	Pongo pygmaeus ppy-let-7b mature miRNA
Sequence	6 - UGAGGUAGUAGGUUGUGUGGUU - 27
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64