Stem-loop ppy-mir-16-2

Accession

MI0014795

Description

Pongo pygmaeus ppy-mir-16-2 precursor miRNA

Sequence

guuccacucUAGCAGCACGUAAAUAUUGGgcguagugaaauauauauuaaacaccaauauuacugugcugcuuuagugugac
(((.((((..(((((((((..((((((((...(((((.......)))))....))))))))..)))))))))..)))).)))

Structure

   c    cU         UA        -gcg     aa 
guu cacu  AGCAGCACG  AAUAUUGG    uagug  a
||| ||||  |||||||||  ||||||||    |||||  u
cag guga  ucgucgugu  uuauaacc    auuau  a
   u    uu         ca        acaa     au 

Annotation confidence Not enough data

Genome context

chr3: 163674255-163674336 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-16-2

Mature ppy-miR-16

• Accession: MIMAT0002653
• Description: Pongo pygmaeus ppy-miR-16 mature miRNA
• Sequence: 10 - UAGCAGCACGUAAAUAUUGG - 29
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64