miRBase entry: ppy-mir-29c

Stem-loop ppy-mir-29c

Accession

MI0014801

Description

Pongo pygmaeus ppy-mir-29c precursor miRNA

Sequence

aucucuuacacaggcugaccgauuucuccugguguucagagucuguuuuugucUAGCACCAUUUGAAAUCGGUUAugauguaggggga
..((((((((((...(((((((((((...(((((((.(((...........))))))))))...))))))))))))).))))))))..

Structure

au        -  ggc           ucc       c   gucu 
  cucuuaca ca   ugaccgauuuc   ugguguu aga    g
  |||||||| ||   |||||||||||   ||||||| |||    u
  ggggaugu gu   AUUGGCUAAAG   ACCACGA Ucu    u
ag        a  ---           UUU       -   guuu

Annotation confidence Not enough data

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Genome context

chr1: 42328128-42328215 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-29c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-29c

Accession	MIMAT0015735
Description	Pongo pygmaeus ppy-miR-29c mature miRNA
Sequence	54 - UAGCACCAUUUGAAAUCGGUUA - 75
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64