Stem-loop ppy-mir-30c-1

Accession

MI0014803

Description

Pongo pygmaeus ppy-mir-30c-1 precursor miRNA

Sequence

accaugcuguagugugUGUAAACAUCCUACACUCUCAGCugugagcucaagguggcugggagaggguuguuuacuccuucugccaugga
.(((((..((((...(.(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).)...))))))))).

Structure

a     cu    ugu U       U   ACA         guga   c 
 ccaug  guag   g GUAAACA CCU   CUCUCAGCu    gcu  
 |||||  ||||   | ||||||| |||   |||||||||    ||| a
 gguac  cguc   c cauuugu ggg   gagggucgg    ugg  
a     --    uuc u       u   --a         ----   a 

Annotation confidence Not enough data

Genome context

chr1: 189330565-189330653 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-30c-1

Mature ppy-miR-30c

• Accession: MIMAT0015737
• Description: Pongo pygmaeus ppy-miR-30c mature miRNA
• Sequence: 17 - UGUAAACAUCCUACACUCUCAGC - 39
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64