miRBase entry: ppy-mir-30d

Stem-loop ppy-mir-30d


Accession
MI0014804
Description
Pongo pygmaeus ppy-mir-30d precursor miRNA


Sequence

guuguUGUAAACAUCCCCGACUGGAAGcuguaagacacagcuaagcuuucagucagauguuugcugcuac
...((.(((((((((...(((((((((((..............))))))))))).))))))))).))...

Structure
guu  U         CCC           guaaga 
   gu GUAAACAUC   GACUGGAAGcu      c
   || |||||||||   |||||||||||       
   cg cguuuguag   cugacuuucga      a
cau  u         --a           aucgac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 142869803-142869872 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-30d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-30d

Accession MIMAT0015738
Description Pongo pygmaeus ppy-miR-30d mature miRNA
Sequence 6 - UGUAAACAUCCCCGACUGGAAG - 27
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64