miRBase entry: ppy-mir-146b

Stem-loop ppy-mir-146b


Accession
MI0014835
Description
Pongo pygmaeus ppy-mir-146b precursor miRNA


Sequence

ccuggcacUGAGAACUGAAUUCCAUAGGCUgugagcucuagcaaaUGCCCUGUGGACUCAGUUCUGGugcccgg
((.((((((.((((((((..((((((((.(((..((....))..))).)))))))).)))))))))))))).))

Structure
  u      G        AU        C   ga  u 
cc ggcacU AGAACUGA  UCCAUAGG Ugu  gc c
|| |||||| ||||||||  |||||||| |||  ||  
gg ccguGG UCUUGACU  AGGUGUCC GUa  cg u
  c      -        -C        C   aa  a 


Annotation confidence Not enough data
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Genome context
chr10: 101489794-101489867 [+]

Database links

Mature ppy-miR-146b-5p

Accession MIMAT0015768
Description Pongo pygmaeus ppy-miR-146b-5p mature miRNA
Sequence 9 - UGAGAACUGAAUUCCAUAGGCU - 30
Evidence not_experimental

Mature ppy-miR-146b-3p

Accession MIMAT0015769
Description Pongo pygmaeus ppy-miR-146b-3p mature miRNA
Sequence 46 - UGCCCUGUGGACUCAGUUCUGG - 67
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64