miRBase entry: ppy-mir-181b-2

Stem-loop ppy-mir-181b-2

Accession

MI0014845

Description

Pongo pygmaeus ppy-mir-181b-2 precursor miRNA

Sequence

cugauggcugcacucAACAUUCAUUGCUGUCGGUGGGUuugagucugaaucaacucacugaucgaugaaugcaaacugcggaccaaaca
....((((((((.....(((((((((..(((((((((((.((.......)))))))))))))))))))))).....))))).)))....

Structure

cuga   -     cucAA         CU           u  gu 
    ugg cugca     CAUUCAUUG  GUCGGUGGGUu ga  c
    ||| |||||     |||||||||  ||||||||||| ||  u
    acc ggcgu     guaaguagc  uagucacucaa cu  g
acaa   a     caaac         --           -  aa

Annotation confidence Not enough data

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Genome context

chr9: 121589374-121589462 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-181b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-181b

Accession	MIMAT0002628
Description	Pongo pygmaeus ppy-miR-181b mature miRNA
Sequence	16 - AACAUUCAUUGCUGUCGGUGGGU - 38
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64