Stem-loop ppy-mir-181c

Accession

MI0014846

Description

Pongo pygmaeus ppy-mir-181c precursor miRNA

Sequence

cggaaaauuugccaaggguuugggggAACAUUCAACCUGUCGGUGAGUuugggcagcucaggcaaaccaucgaccguugaguggacccugagaccuggaauugccauccu
.(((.......(((..(((((.((((..((((((((..(((((((.(((((...........)))))))))))).))))))))..)))).))))))))........))).

Structure

c   -aaauuug   ag     g    AA        CU       A     ggca 
 gga        cca  gguuu gggg  CAUUCAAC  GUCGGUG GUuug    g
 |||        |||  ||||| ||||  ||||||||  ||||||| |||||    c
 ccu        ggu  ccaga uccc  gugaguug  cagcuac caaac    u
u   accguuaa   --     g    ag        -c       -     ggac 

Annotation confidence Not enough data

Genome context

chr19: 13988167-13988276 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-181c

Mature ppy-miR-181c

• Accession: MIMAT0015778
• Description: Pongo pygmaeus ppy-miR-181c mature miRNA
• Sequence: 27 - AACAUUCAACCUGUCGGUGAGU - 48
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64