Stem-loop ppy-mir-181d

Accession

MI0014847

Description

Pongo pygmaeus ppy-mir-181d precursor miRNA

Sequence

uccccuccccuaggccacagccaaggucacaaucAACAUUCAUUGUUGUCGGUGGGUugugaggaccgaggccagacccaccgggggaugaaugucacuguggcugggccagacacggcuuaaggggaauggggac
((((((((((((((((...(((..(((((((....(((((((((....((((((((((.((.(........)))))))))))))..)))))))))...))))))).))).......))))).))))))..))))).

Structure

-     --      -     ----aca   aa       aucA         GUUG          g  a gac 
 ucccc  uccccu aggcc       gcc  ggucaca    ACAUUCAUU    UCGGUGGGUu ug g   c
 |||||  |||||| |||||       |||  |||||||    |||||||||    |||||||||| || |    
 agggg  agggga uucgg       cgg  ucggugu    uguaaguag    ggccacccag ac c   g
c     ua      a     cacagac   -g       -cac         --gg          -  - gga 

Annotation confidence Not enough data

Genome context

chr19: 13988344-13988479 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-181d

Mature ppy-miR-181d

• Accession: MIMAT0015779
• Description: Pongo pygmaeus ppy-miR-181d mature miRNA
• Sequence: 35 - AACAUUCAUUGUUGUCGGUGGGU - 57
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64