miRBase entry: ppy-mir-323

Stem-loop ppy-mir-323

Accession

MI0014891

Description

Pongo pygmaeus ppy-mir-323 precursor miRNA

Sequence

uugguacuuggagagAGGUGGUCCGUGGCGCGUUCGCuuuauuuauggcgCACAUUACACGGUCGACCUCUuugcaguaucuaauc
..((((((.(.((((((((.(.(((((..(.((.((((........)))).)).)..))))).).)))))))).))))))).....

Structure

---uu      u g        G U     GC C  U    uua 
     gguacu g agagAGGU G CCGUG  G GU CGCu   u
     |||||| | |||||||| | |||||  | || ||||    
     cuauga c uuUCUCCA C GGCAC  U CA gcgg   u
cuaau      - g        G U     AU A  C    uau

Annotation confidence Not enough data

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Genome context

chr14: 102587145-102587230 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from ppy-mir-323

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-323-5p

Accession	MIMAT0015825
Description	Pongo pygmaeus ppy-miR-323-5p mature miRNA
Sequence	16 - AGGUGGUCCGUGGCGCGUUCGC - 37
Evidence	not_experimental

Mature ppy-miR-323-3p

Accession	MIMAT0015826
Description	Pongo pygmaeus ppy-miR-323-3p mature miRNA
Sequence	51 - CACAUUACACGGUCGACCUCU - 71
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64