Stem-loop ppy-mir-340

Accession

MI0014904

Description

Pongo pygmaeus ppy-mir-340 precursor miRNA

Sequence

uuguaucuggugugaUUAUAAAGCAAUGAGACUGAUUgucauaugucguuugugggauccgucucaguuacuuuauagccauaccugguaucuua
..(((((.((((((.((((((((...((((((.((((.(((((.......))))))))).))))))....)))))))).)))))).)))))....

Structure

--uu     u      a        -CAA      U    g     ug 
    guauc ggugug UUAUAAAG    UGAGAC GAUU ucaua  u
    ||||| |||||| ||||||||    |||||| |||| |||||  c
    uaugg ccauac gauauuuc    acucug cuag ggugu  g
auuc     u      c        auug      c    -     uu 

Annotation confidence Not enough data

Genome context

chr5: 182637250-182637344 [-]

Mature ppy-miR-340

• Accession: MIMAT0015843
• Description: Pongo pygmaeus ppy-miR-340 mature miRNA
• Sequence: 16 - UUAUAAAGCAAUGAGACUGAUU - 37
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64