miRBase entry: ppy-mir-376b

Stem-loop ppy-mir-376b

Accession

MI0014923

Description

Pongo pygmaeus ppy-mir-376b precursor miRNA

Sequence

caguccuucuuugguauuuaaaacguggauauuccuucuauguuuacgugauuccuggauaAUCAUAGAGGAAAAUCCAUGUUuucaguaucaaaugcug
((((.....(((((((((.(((((((((((.(((((.(((((.((((..........).))).)))))))))).))))))))))).))))))))).))))

Structure

    ccuuc         u           a     u     u   - guga 
cagu     uuugguauu aaaacguggau uuccu cuaug uua c    u
||||     ||||||||| ||||||||||| ||||| ||||| ||| |     
gucg     aaacuauga uuUUGUACCUA AAGGA GAUAC Aau g    u
    ----u         c           A     -     U   a gucc

Annotation confidence Not enough data

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Genome context

chr14: 102602569-102602668 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from ppy-mir-376b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-376b

Accession	MIMAT0015865
Description	Pongo pygmaeus ppy-miR-376b mature miRNA
Sequence	62 - AUCAUAGAGGAAAAUCCAUGUU - 83
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64