miRBase entry: ppy-mir-376c

Stem-loop ppy-mir-376c

Accession

MI0014924

Description

Pongo pygmaeus ppy-mir-376c precursor miRNA

Sequence

aaaagguggauauuccuucuauguuuauguuauuuaugguuaAACAUAGAGGAAAUUCCACGUuuu
((((.(((((..(((((.(((((((((.............))))))))))))))..))))).))))

Structure

    g     ua     u         uguua 
aaaa gugga  uuccu cuauguuua     u
|||| |||||  ||||| |||||||||     u
uuuU CACCU  AAGGA GAUACAAau     u
    G     UA     -         uggua

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 102601818-102601883 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from ppy-mir-376c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-376c

Accession	MIMAT0015866
Description	Pongo pygmaeus ppy-miR-376c mature miRNA
Sequence	43 - AACAUAGAGGAAAUUCCACGU - 63
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64