miRBase entry: ppy-mir-379

Stem-loop ppy-mir-379

Accession

MI0014927

Description

Pongo pygmaeus ppy-mir-379 precursor miRNA

Sequence

agagaUGGUAGACUAUGGAACGUAGGcguuaugauuuuugaccuauguaacaugguccacuaacucu
((((.((((.(((((((..(((((((((..........)).)))))))..))))))).)))).))))

Structure

    a    A       GA       -  uuau 
agag UGGU GACUAUG  ACGUAGG cg    g
|||| |||| |||||||  ||||||| ||     
ucuc auca cugguac  uguaucc gu    a
    a    c       aa       a  uuuu

Annotation confidence Not enough data

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Genome context

chr14: 102583478-102583544 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ppy-mir-379

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-379

Accession	MIMAT0015869
Description	Pongo pygmaeus ppy-miR-379 mature miRNA
Sequence	6 - UGGUAGACUAUGGAACGUAGG - 26
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64