miRBase entry: ppy-mir-410

Stem-loop ppy-mir-410

Accession

MI0014934

Description

Pongo pygmaeus ppy-mir-410 precursor miRNA

Sequence

gguaccugagaagagguugucugugaugaguucgcuuuuauuaaugacgAAUAUAACACAGAUGGCCUGUuuucaguacc
(((((.((((((.((((((((((((.((.((((((..........).))))).)).)))))))))))).)))))))))))

Structure

     c      g            a  a     - uuuu 
gguac ugagaa agguugucugug ug guucg c    a
||||| |||||| |||||||||||| || ||||| |     
ccaug acuuuU UCCGGUAGACAC AU UAAgc g    u
     -      G            A  A     a uaau

Annotation confidence Not enough data

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Genome context

chr14: 102628634-102628713 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from ppy-mir-410

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-410

Accession	MIMAT0015877
Description	Pongo pygmaeus ppy-miR-410 mature miRNA
Sequence	50 - AAUAUAACACAGAUGGCCUGU - 70
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64